EST details — SGN-E398065

Search information 
Request: 398065Match: SGN-E398065
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182278Clone name: TUS-39-C12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182278 is on microarray TOM1 spot ID 1-1-5.3.8.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C3325 [cLEC-20-D21] Trace: SGN-T27794 EST: SGN-E206012 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E398065Length: 356 bp (865 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E398065 [] (trimmed) CCCCTACTTTAATTTGTATTTATAAAAAAACCAATTACAAAAGCTGGAATAAACTTCCATACTAATACAAGAAAGAGATAAAAAGAAAATTAATA
GTACATTGATAGGATTTTTTTTTGTTGCAACAAGTCTATTTCCAAACAATTTTACGTTAATTAGACCTTCATTGCTTGTCCCTTTAACTTCTCTC
AGCATTCGTACCTAAAAACTTTCAACAAATACTTGAAAGCACGTTCGATTTATTCGTAGTAATATCACCTATATCTAATATACACTACCATAGTT
CTCAAGATTTATGCAGTTGCCACATCAAATCTTCTGATTAACTCCTTCCTCTTTTTTTTTCTATCGAAGGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E398065] SGN-U578070 Tomato 200607 Build 2 64 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199391 [Download][View] Facility Assigned ID: FA0AAD27BB06RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.900 Expected Error Rate: 0.0076 Quality Trim Threshold: 14.5