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EST details — SGN-E397820

Search information 
Request: 397820Match: SGN-E397820
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176802Clone name: TUS-24-O8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176802 is on microarray TOM1 spot ID 1-1-1.3.9.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C27911 [cLEF-45-P22] Trace: SGN-T61368 EST: SGN-E246633 Direction: 5' Facility: TIGR
Clone: SGN-C176802 [TUS-24-O8] Trace: SGN-T193108 EST: SGN-E391782 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E397820Length: 437 bp (849 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E397820 [] (trimmed) ACATATGGTATGTGGAATTATTCATATTAGCAACATCAAAAGGGAAATAATAATAATTATAGATGTTCAATATTTAATCCCTTAATATTTTAAAT
AGGAGTTTGACTTGATTCATATGTCAAACTTAAATTTTAACTTCTCGACGTCTCATATGAGAATTTTATTTAATACTAGCAACATGTCATAAGTA
TACATCATTTTAGTAAGGACGTTGTCCGATCCAGTTGCCTACAGGATCATAGTTGCAAGAAATGAACCACCATCCGTTGTTGCAACGTGCCCGAC
CACAACCTAGTCGGACTGAGTTGCGCCAGACTACTTGAGTATAATGTCTACACTTTTTTCCAACAACACATTGGTTGGTAGCGTAGTTATACCTA
GGCCTCTCAGACACCCACAAATGCACGGCTGCCCTCCCCGTGAACTCACCCACCACC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397820] SGN-U579545 Tomato 200607 Build 2 213 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199146 [Download][View] Facility Assigned ID: FA0AAD12BH04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.915 Expected Error Rate: 0.0037 Quality Trim Threshold: 20.5