EST details — SGN-E397792

Search information 
Request: 397792Match: SGN-E397792
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185271Clone name: TUS-46-P5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185271 is on microarray TOM1 spot ID 1-1-4.4.12.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C77350 [cLES-20-K24] Trace: SGN-T102067 EST: SGN-E290388 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E397792Length: 318 bp (866 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E397792 [] (trimmed) CGTCTATACACCAATTTTTTTTTGGGATCCCTTCACTTTGCATTAACTCGAAACCAGGAATATTAATTTCTGTGTTAATAGTTATTTTTTCCTTC
ATATTAGACAACTAAAAAGATTAAGTTCAAATGATAATATTGGGCGTAGGTGGAGAGATTGGGACAGATTCATAAAATTGACTTTAACTTGGGGT
TGTGTCATGTGAATATAATAGTAGTAATAAGTTCAAAGTTATAGGTGATCCCTATAAATATGATATGTGATAACTCAAATGAATGTGTACACATA
CTTTTATATATATGTATGTGATTGAACTCAAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397792] SGN-U576520 Tomato 200607 Build 2 21 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199118 [Download][View] Facility Assigned ID: FA0AAD34CH03RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.918 Expected Error Rate: 0.0044 Quality Trim Threshold: 12.5