EST details — SGN-E397762

Search information 
Request: 397762Match: SGN-E397762
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185029Clone name: TUS-46-F3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185029 is on microarray TOM1 spot ID 1-1-6.2.12.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72187 [cLER-1-G5] Trace: SGN-T91843 EST: SGN-E280289 Direction: 5' Facility: TIGR
Clone: SGN-C72187 [cLER-1-G5] Trace: SGN-T91844 EST: SGN-E280290 Direction: 3' Facility: TIGR
Clone: SGN-C185029 [TUS-46-F3] Trace: SGN-T199025 EST: SGN-E397699 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E397762Length: 712 bp (866 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E397762 [] (trimmed) AAGAAAAGAAAAAAAACCATAAAATTGGTTTGGGTCAACCTAACCAAGATGATCTTAACAATTATATCTAGCACTAAAAATTGATCCTCTCTCAA
AAGAAACTTGTGCTAGCTAATTAAAACTTTTTTAATTCATGTTGTTCCATTGCTTGTGTCCTGGCACCCATTTTGGGCATTTTGGGCTAAAGTAG
TTTGACACTACTCTTGAATTCAATAGCTCAACAATTGGTTCAAATTTCACACATCTTGGTGTCTTGTACTGATTTATTGATGCACCTAAACTTAT
AGCATAGTCCATCAACTTATCAAAAGTTCCACTTTCAACAATCTTGATTTCCAATGGCCCAATGGATTTGTCTGAGGCACGACCTTGGCGGTATA
CGCTGTTGAGAGACTCTTCGATGGTGAGACAACAATCTTCGAAAACAGATGGAGGAACTGGGGTTGATCCATTAACATTTAGCTCCCAGTATAAC
ACATAATGCCCTGGAATGGTTGTGGTTGTATCAGCATAACTTGTGTATTCTGTCACATGTGCATCAAATGGCATAAGATGTGTGACTGCATTTTT
TACTGCATTTTGAAGTTCAACTTCATCCGTCTTGTCTGAATCAATACTCAACACTACATTCTTCCTGCAGATAAAATTGAATTGGGGCGCGTTGT
TCTTGAATCCAGCTACACGCAACACATCGCCTACACGATACCTATAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397762] SGN-U567051 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199088 [Download][View] Facility Assigned ID: FA0AAD34CC02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.950 Expected Error Rate: 0.0011 Quality Trim Threshold: 14.5