EST details — SGN-E397737

Search information 
Request: 397737Match: SGN-E397737
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185237Clone name: TUS-46-N19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185237 is on microarray TOM1 spot ID 1-1-6.2.11.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C76465 [cLES-18-C10] Trace: SGN-T101688 EST: SGN-E289246 Direction: 5' Facility: TIGR
Clone: SGN-C185237 [TUS-46-N19] Trace: SGN-T1882 EST: SGN-E378476 Direction: 5' Facility: Giov. Lab
Clone: SGN-C185237 [TUS-46-N19] Trace: SGN-T199062 EST: SGN-E397736 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E397737Length: 572 bp (867 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E397737 [] (trimmed) CTTTTCTATTTCCCCTCTCTCTCTCTCTAGATTTTTTTCTCTCTCTCTCTAAAACTTCCAAATTCTATCCAAAGAGAAAAAAAAAAAATAAAAAA
AAAATCATGTCTACAGATCTACAATTTCCACAAGATCTCTTTGAAATGAATTCACCAAATATCAATTCTTCTCAAAGATGTATCAACAGCAATAT
TAATATTATTATCAGTAATAAAGATGATTGCAAAACCCCAAAATCTTCACCTTTTTTAATCCCAAAAATCCTCAAATGCCCAGCTGCACCTAAAA
AACCCAGAAGGGTAATTTCGTCCTGTAAGAGAAAATTACAATTTGTTGAAATTGTTGCTAGTAAAGAAGTTGAATCATTTTTCAAAATCCTCGAT
GATGATGTCGTTGCTTCGTCTTCGAAAAAGATATGAGGTGCTCGAAAATAATCAAATCAAATCGATTCATTCGAGTGTACGAGAATGATTAAAGT
TAGTTCTATTTGAAGATCGACGATAAGTCGTGGAAGGTCACGTGCTTTAAGATTTGATGTTTTCACCAAAAATCTGATAAAAATTATACGATCGA
TC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397737] SGN-U570658 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199063 [Download][View] Facility Assigned ID: FA0AAD34CG10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.927 Expected Error Rate: 0.0041 Quality Trim Threshold: 14.5