EST details — SGN-E397725
| Search information |
| Request: 397725 | Match: SGN-E397725 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C185177 | Clone name: TUS-46-L7 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C185177 is on microarray TOM1 spot ID 1-1-2.4.12.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C70936 [cLER-16-F8] | Trace: SGN-T95738 | EST: SGN-E284465 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C185177 [TUS-46-L7] | Trace: SGN-T1879 | EST: SGN-E378329 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C185177 [TUS-46-L7] | Trace: SGN-T199050 | EST: SGN-E397724 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E397725 | Length: 575 bp (867 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E397725 [] (trimmed)
TCGCTCTCTCTGTAAATCGAAGAAGAAAAAAATGTTGCTGGGGAAGAGGACTCGGCCACCGATGAAGAGAACAACAAGTATGACAGAATTCACTT
TAGATCTCAATCTCAATAATCCTGACCCTAATTCTTCTCTTAGTAATTACAATAATCCATTCGATCCTCACAATCCTTTTTCACCTGCAAACACC
CAGCAGCAACACCTAGATCAACAACGTTTATTGACAGCAGCGAAAACCGTTTCCGTCAGAAACCGCCGTAAATCTGCTGATTTTCTAGAAACTGC
TAATTTTTTGAAAGCTTGCTTCCTCTGTAAACGCCGGTTAATCCCTGGCCGGGATATCTACATGTACAGAGGAGATAGTGCTTTTTGCAGTCTAG
AGTGTAGACAGCAGCAGATGAATCTAGATGAGAAGAAGGACAAGTGTTCGTTGGTTGCATCTAGAAAGGACTACATGAAGAACTCCGTCGCTGCC
GCCGTAGCCGGCGGGAAGGGATCTGACGTTTCCGCCACAAGCGAGACTGTCGCCGCCGTTTAGGTAGTGGAAATTTTTATTAAAACACCCTGTAT
GGATC
TAGATCTCAATCTCAATAATCCTGACCCTAATTCTTCTCTTAGTAATTACAATAATCCATTCGATCCTCACAATCCTTTTTCACCTGCAAACACC
CAGCAGCAACACCTAGATCAACAACGTTTATTGACAGCAGCGAAAACCGTTTCCGTCAGAAACCGCCGTAAATCTGCTGATTTTCTAGAAACTGC
TAATTTTTTGAAAGCTTGCTTCCTCTGTAAACGCCGGTTAATCCCTGGCCGGGATATCTACATGTACAGAGGAGATAGTGCTTTTTGCAGTCTAG
AGTGTAGACAGCAGCAGATGAATCTAGATGAGAAGAAGGACAAGTGTTCGTTGGTTGCATCTAGAAAGGACTACATGAAGAACTCCGTCGCTGCC
GCCGTAGCCGGCGGGAAGGGATCTGACGTTTCCGCCACAAGCGAGACTGTCGCCGCCGTTTAGGTAGTGGAAATTTTTATTAAAACACCCTGTAT
GGATC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E397725] | SGN-U580528 | Tomato 200607 | Build 2 | 56 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T199051 [Download][View] | Facility Assigned ID: FA0AAD34CF04RM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.975 | Expected Error Rate: 0.0013 | Quality Trim Threshold: 14.5 |
Working
