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EST details — SGN-E397570

Search information 
Request: 397570Match: SGN-E397570
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184973Clone name: TUS-46-C19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184973 is on microarray TOM1 spot ID 1-1-6.3.12.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C2012 [cLEC-14-J11] Trace: SGN-T26468 EST: SGN-E204852 Direction: 5' Facility: TIGR
Clone: SGN-C184973 [TUS-46-C19] Trace: SGN-T198897 EST: SGN-E397571 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E397570Length: 701 bp (864 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E397570 [] (trimmed) GTGATTATTTATGTTGGTGTTGTTTATTTTATCAATTGTTAGGAATAATACATTTATTTAGTTATAAATAGGTTGAAAACACAACGATCCCTTTA
TAATACATGAAAAGATTAGGTGCTTTGAAGAAGAAAAAAATGACTACAAATGCTGTTTACACAGTAAGCTGCAATCCAGCATTAAAAAACTGGCA
TTTCTAGTTCCATGACTTTTTAGCCAGTGAGTTGAACAAGAAGGTGAAAACACTATCAATAAACTACACCAGTTCGAGATCATTATGGAACAGTA
TTTAGACATCAACGGAGAGACGATATAGGCTACCTTTCCTTGGTATGTTCAATGCTTTCAAGCCTCTACACCTTGGACAGAAGGCTGTTTTTCAT
CTTCAGTATTTTCTTGCTCGTCCTTGTCCTCTTCATCAGCCTCATCGACTAGCCTAGTGAGCTCATCCTGGATCATATTCTTAACAGATGTCTTT
CTGAGTGTAAGATCGGTATCATACCGCTTGGCAAGCATTTGCACAATGTCGGTAAAGGTGGCCGTATTAAAGTCAACTTCTTTTAGAACTTCACA
AATTGCACTTCTGAGTTCATCATCACTTGGCTTCAATTTATTCGCTTTCTTATGGCCCTTCCCATTCGGATCTTTTTTCCCAGTTTTGTCTTTTG
AACTAGGTTTTTTTGGTGTAAATAAATTTCCCTTAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397570] SGN-U576784 Tomato 200607 Build 2 20 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198896 [Download][View] Facility Assigned ID: FA0AAD34AB10FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.955 Expected Error Rate: 0.0060 Quality Trim Threshold: 14.5