EST details — SGN-E397440

Search information 
Request: 397440Match: SGN-E397440
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184550Clone name: TUS-45-B4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184550 is on microarray TOM1 spot ID 1-1-5.2.14.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C132540 [cTOD-3-A9] Trace: SGN-T142032 EST: SGN-E329577 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E397440Length: 397 bp (881 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E397440 [] (trimmed) GCCCTTTCTCCCGTCGTTTCTTCTTTCTCTCTCCGCATCACCGACAGAGAAGAAGAAGAGGAAGGATATACCGATACAGCAATTATTAGGGATTT
GTATATTATTTTTTCAGGTAAAATATACATTTACAACTATTGTTTTCTACAGCTCAGACGATATTCAGCCATTACTCTTTCTCCGGAATTTGCTT
CTCAAACATGTCTTACGCCTATCTCTTCAAGTATATCATCATCGGCGATACCGGAGTTGGAAAATCATGTCTTCTGTTGCAATTTACTGACAAAC
GATTTCAACCTTTTTTTGATTTGACCATCGGTGTTGAATTTGGGGCTAGAAAGATCACAATACAAAACAAGCCCATTAAACTACAAATCTGGGAT
ACCGCGGGTCAAGAATC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397440] SGN-U562695 Tomato 200607 Build 2 27 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198766 [Download][View] Facility Assigned ID: FA0AAD33DA02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0114 Quality Trim Threshold: 14.5