EST details — SGN-E397412

Search information 
Request: 397412Match: SGN-E397412
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184837Clone name: TUS-45-N3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184837 is on microarray TOM1 spot ID 1-1-6.2.14.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C88055 [cLET-6-M8] Trace: SGN-T103829 EST: SGN-E291576 Direction: 5' Facility: TIGR
Clone: SGN-C184837 [TUS-45-N3] Trace: SGN-T198737 EST: SGN-E397411 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E397412Length: 298 bp (894 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E397412 [] (trimmed) CTGGAATTTAAAAAGAGAATTCTAGAATGTTCTGGAATAGGGGACGAGAGTTACGTCCCGAGATCCATTGGATCGTCAGAAAACACAGCTACGAT
GAAAGAAGGACGATACGAGGCATCAACGGTGATGTTCGGAGCTCTGGATGAACTGTTCGAGAAGGCGAAAATTCGGCCTAAGGACGTCGGAGTAT
TGGTGGTGAATTGCAGTATTTTCAACCCAACACCATCACTTTCAGCCATGATCATAAATCACTATAAAATGAGGGGAAATATACTTTATTTCAAT
TTAGGTGGAATGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397412] SGN-U563627 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198738 [Download][View] Facility Assigned ID: FA0AAD33CG02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0051 Quality Trim Threshold: 14.5