EST details — SGN-E397317

Search information 
Request: 397317Match: SGN-E397317
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184553Clone name: TUS-45-B7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184553 is on microarray TOM1 spot ID 1-1-2.2.14.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184553 [TUS-45-B7] Trace: SGN-T198642 EST: SGN-E397316 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E397317Length: 687 bp (853 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E397317 [] (trimmed) TTTTTTTTCAATCCAATTTAACACATGCTAAAGATTTATTAATCATTTTTAATTATTAGGTTACCAACTAATTTTTACACACACAATAATAGGTG
TAGTTTTATTTCTCACAACAAAATTTTCAACCCACATACAAAAAAAAATAAAAATACACAGTATATATATGGGTAAGTGATGAATAACTTTCCTT
TTACACACTTTTTTTTAACGCTTAATATACTCTCTTTTATTATGTACAAAGCACACTCACTTGTGATTAAACATAATTATGAATCCACTGACTCT
AAATTATGGATCCATCTCTGTCGGAACCAATACTTCCATCGGCTCTTGGCCGAGAATTATTGGCTTTATATTATTCTTCAATATTTCTTTGTATG
TATCAGTATCACCGACTTTTCGACGAACCTCAACGACAACAAATCCATCTATCACTCTACTTATTTCCATGTTCATAATCAATTTACCTTTCTTC
AACTCTATTCCCCCTTCTTTTTTCTTCTTTAACCTCATATTCTCCTTCTTTGCCATTTCTTCTACTTTCTCCATTACTATCTCCAATGATTCTTC
AACAACTAATCTTTCGAAATCCTCTAAAGGGTTAAAACCGTCATTTAACAATCCGGAGAGGTCTAATCCCATAGAGAATGAAATTATATCAAAAC
CATTCAAATAAGAATTCTTCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397317] SGN-U568751 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198643 [Download][View] Facility Assigned ID: FA0AAD33CA04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.906 Expected Error Rate: 0.0052 Quality Trim Threshold: 14.5