EST details — SGN-E397316

Search information 
Request: 397316Match: SGN-E397316
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184553Clone name: TUS-45-B7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184553 is on microarray TOM1 spot ID 1-1-2.2.14.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184553 [TUS-45-B7] Trace: SGN-T198643 EST: SGN-E397317 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E397316Length: 487 bp (850 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E397316 [] (trimmed) AAAAACCCCCCTTTGAAAAAAATTCAAAAAACCCCAAAAATGGGCCCAACATTTTTTTTTTTTTTCAAAAAAGACCCCCGTGTAACCCCCCAATT
AAAAATTTAAAAAAAAAAATTTTTTTCAAAATTTTTGCGGGGGCCAACGCCCCCAAAAGGGTTTTTTTTCCCCCGAGAACCCAAAAATTCACCAA
AAAAAGAATGGAAAAATCCCTAGAGGGGGGGGATTTGCCCAAAGGGGCCCCCGCAGGGGAAATAAAAAAGGGGGGCGGCCGGCGGGTTAAAATTT
TTACCAAAAAAAGAATTTGCCCCGCCGTTTTAGGGGGGAAAATTAAACCCGGAATTCCCATTAAAAAAATTTTTAAACCCCCCCCCTTTTGGAAA
CTTGGAAAAGGGGGGGGCCCCAAAAAAAAAAACTTCCTCCCCGGGGAATTTTGAAAAGGGGGGGAAATTTTCCCCAAATTGGGTAAAGGGGGGAA
ATTTCCCAAAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397316] SGN-U603247 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198642 [Download][View] Facility Assigned ID: FA0AAD33CA04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.804 Expected Error Rate: 0.0308 Quality Trim Threshold: 14.5