EST details — SGN-E397288

Search information 
Request: 397288Match: SGN-E397288
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184636Clone name: TUS-45-E18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184636 is on microarray TOM1 spot ID 1-1-7.1.14.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C83278 [cLET-23-P5] Trace: SGN-T108288 EST: SGN-E295563 Direction: 5' Facility: TIGR
Clone: SGN-C184636 [TUS-45-E18] Trace: SGN-T199740 EST: SGN-E398414 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E397288Length: 346 bp (827 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E397288 [] (trimmed) ATAAGAAGATTAAGGATGTTATTACTTCACTACAACATATATGATATAACTAGTGTTCATTCAAGTAAAACTGCATACTAATTACAACTGGATGA
GTTATATAGCAGATATTGACTTTGCTTACAATTATTAAGTGTATCTAGTAAGTAATAAGTATTCCTTCATTCTACGTCTGCATGAGCTTCAAGAA
ATCGTTCAATTATGAGCCTTTCATCTGAGGTAAGATCAGGGTCATCACCGGTGAGCCTCTTTCGTACTGCTGCACTAATGATGTTGTCTGGATTT
TCGTCATGAACCTCTACATATTTGTTGACATGTCCATCTTTGTTGGGAGAAGTGATCGGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397288] SGN-U578949 Tomato 200607 Build 2 18 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198614 [Download][View] Facility Assigned ID: FA0AAD33BC09FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.951 Expected Error Rate: 0.0071 Quality Trim Threshold: 14.5