EST details — SGN-E397237

Search information 
Request: 397237Match: SGN-E397237
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184669Clone name: TUS-45-G3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184669 is on microarray TOM1 spot ID 1-1-6.3.14.8 [Order] [Tomato Microarray Database]
See unigene SGN-U581507 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C88230 [cLET-7-H5] Trace: SGN-T104260 EST: SGN-E292007 Direction: 5' Facility: TIGR
Clone: SGN-C184669 [TUS-45-G3] Trace: SGN-T198477 EST: SGN-E397151 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E397237Length: 609 bp (864 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E397237 [] (trimmed) ATAACAATAGATCAAAATCATATAACTTTAGTATTTCTGAAAATAAACTTCCATTTTTCTAAATGGGCATACAGAATCCCCTTATTGATTACATC
CAAATATAACTTATAGACTTCACAACGTAATACATAAACATAATTTGCATTCTCTCTCTATATATAAATAAAGACGCTTAGCCCTGGGCGAAGTT
CTTTTGATTGTTACAGTCCAAATTTTCACCAGTAGGAACATTCAACATACCACAATACCTCCTGTAAAATCCAATTCGACTTTCCGCTGCAGTAT
TCGGACCCATCCCACATTCAAATTGACCGTTAATGATGTTGGTAATGACACCGTACCCTGGAACTCTATTAGCTGCTGTATCTTTAGGGGATGGC
GTCCATTGTCCAATGATAACGTTGTGGCATGATGGTTTATTATCCTGTTCTGTCATCCAGAACCATATTGCTGTTTTGAATGATATTATAGGATC
TGTCGCAACTAAATCAGGGTTGTTCACTAACTCTTGTCCAACACCAATACCTTGTCCAGCTCGTTCGTAGTTAAATTGGTGTGTCAATTGGATAA
GTCCTCTGCCATAATATCTTGTCTGACTGCTCCTATTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397237] SGN-U581507 Tomato 200607 Build 2 59 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198563 [Download][View] Facility Assigned ID: FA0AAD33AD02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.951 Expected Error Rate: 0.0019 Quality Trim Threshold: 14.5