EST details — SGN-E397114

Search information 
Request: 397114Match: SGN-E397114
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184456Clone name: TUS-44-N6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184456 is on microarray TOM1 spot ID 1-1-3.2.16.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C76747 [cLES-18-P7] Trace: SGN-T101605 EST: SGN-E289163 Direction: 5' Facility: TIGR
Clone: SGN-C184456 [TUS-44-N6] Trace: SGN-T198441 EST: SGN-E397115 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E397114Length: 593 bp (863 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E397114 [] (trimmed) TATTCTCGAGCATTTCGATACCTTCATAATTCGGTGTCAAGGTGGCTTTTGATTCTTTGAAATCGTGCGGTAAATCAAGCTTATCGAACTACAAG
TGGCCTGAATTCGGCCGATTTCGAAGTGAAGCTATAAACCTGCATCCACAGAAAAATTGTCAGTTTTAAACATACTGATCTGTGTCGATCCCTTC
GATTGTTTGCTCCTTGTCTTGACGTCCTCGGTTGATTTCCCGATTTCTCGACTCTTGATAGATAAGAAAATATCTTATGCCAAAACAGATGAAAT
ATAAAAGGGAAATTTTTAAGAGAAGCAAGAAATTTTTTAAGAAATAGTATCTCGAAAAAGTCAATGCCAAGTCATGTCATGTCAGGCTTAACGAG
CTTCTTTGAGTCCGACGCTTGTCGAATGAATTTCAGAGGCATTCCAGACTTGTGGGGAAGTCCCATGACGAAATTTTGAGGCCATCCTCAAAATT
TCTGTCCCAGTTTAGTATCTTGTTCATCTTTCCATTGTAACCGAACAGATCTCGGAATTTTTGAGATCTTCTAAAAAATTCTGTCCCAGTCGCAA
ATTCGAAATGTCTTTAATTTGAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397114] SGN-U572461 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198440 [Download][View] Facility Assigned ID: FA0AAD32DG03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0057 Quality Trim Threshold: 14.5