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EST details — SGN-E396929

Search information 
Request: 396929Match: SGN-E396929
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184221Clone name: TUS-44-D11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184221 is on microarray TOM1 spot ID 1-1-6.4.16.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C65540 [cLEN-10-H4] Trace: SGN-T89316 EST: SGN-E275444 Direction: 5' Facility: TIGR
Clone: SGN-C184221 [TUS-44-D11] Trace: SGN-T198256 EST: SGN-E396930 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E396929Length: 726 bp (870 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E396929 [] (trimmed) GAAAAATAAAACCAACTACAGCTTTATTTGGAACAAAGAGTTTATTTGGTTGGGAATAACAAGAAACAAGTGCAACAAACATTGTATTTAAATCA
ATAATACTATACAATATAATACAATACAACACAACACACAAGACAATACAATACAATACTCTTTATTTGGAACAAAGAGTTTATTTGGTTGGGAA
TAACAAGTAACACAAGCACAACAAACTGATTGAATAATAAGTTCTATATAGACACACTGTTGGGAATTCCTTTGCCTGTGAGTCCCTCTTCACTT
GTGGGAAAGAGCAACGTATATGGAACGTTAACAGGCCCTGACCTGTTCTTCCAACTCTTATGACTATTCATTATCATAATTCGATTCTCGATATC
ACTTAGCATCTTTCCAAACCTCTCAAAAGCTACAAGTGGTTCTTTATCCTTTGTCCATTCAATTGAGTCCCTTTGTCCCAAGTAAACCTCATCTG
AAGCATGCCTTGACGAGACCTCAAAGATGGAAATTTCAAGCAGTGATTGCAACTGAGGAACAAATGTTTTTAGGAATACCTTGTCTGGATTTGTC
TTGAGCTCTTCATACTCAACACTTCCTGGCTCTGGCATCAAATTACAGCTTAAAGTAGGGCGATTAGGGAGATAACCAGCGTAAGAGTATAAGCC
AAAATGGAGTGCTGCATGAAGTGCTGAAGCTATCCATATAATGATGGTGCAACAATCTCTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396929] SGN-U578028 Tomato 200607 Build 2 233 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198255 [Download][View] Facility Assigned ID: FA0AAD32CB06FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.957 Expected Error Rate: 0.0077 Quality Trim Threshold: 14.5