EST details — SGN-E396567

Search information 
Request: 396567Match: SGN-E396567
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184046Clone name: TUS-43-M4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184046 is on microarray TOM1 spot ID 1-1-5.1.19.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C3419 [cLEC-20-I12] Trace: SGN-T27615 EST: SGN-E205833 Direction: 5' Facility: TIGR
Clone: SGN-C184046 [TUS-43-M4] Trace: SGN-T197892 EST: SGN-E396566 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E396567Length: 458 bp (875 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E396567 [] (trimmed) CTATTATTCCTTTATGTTAAATACCTCATTAAACTATAACATTTTCCCCCAACAAATTAACCAAAATCCCCTCTAATAAAAGCTATGGTTCCAAC
TCCTCAAAGTGATTTACCTCTTAATGAGAATGACTCACAAGAGATGGTATTATATGAAGTTCTTAATGAAGCTAATGCTCTAAATATTCCTTATT
TACCCCAACGAAATCAATTACTCCCTAGAAATAATATTCTTCGTCCATTACAGTGCATAGGCAAGAAATACAGAGGAGTACGACGTCGTCCGTGG
GGGAAATACGCTGCTTAAATTCGCGATTCGGCTAGACATGGTGCGAGAGTATGGCTAGGTACGTTCGAAACTGCTGAAGAAGCTGCGTTAGCTTA
TGATAGAGCGGCTTTTAGAATGCGAGGTGCTAAGGCACTACTTAATTTTCCATCTGAAATAATGAACGCCCTCTGTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396567] SGN-U571539 Tomato 200607 Build 2 16 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197893 [Download][View] Facility Assigned ID: FA0AAD31BG02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.958 Expected Error Rate: 0.0032 Quality Trim Threshold: 14.5