EST details — SGN-E396391

Search information 
Request: 396391Match: SGN-E396391
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180921Clone name: TUS-35-J23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180921 is on microarray TOM1 spot ID 1-1-2.2.17.20 [Order] [Tomato Microarray Database]
See unigene SGN-U578195 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C66343 [cLEN-13-N22] Trace: SGN-T90170 EST: SGN-E274867 Direction: 5' Facility: TIGR
Clone: SGN-C180921 [TUS-35-J23] Trace: SGN-T1652 EST: SGN-E378581 Direction: 5' Facility: Giov. Lab
Clone: SGN-C180921 [TUS-35-J23] Trace: SGN-T199717 EST: SGN-E398391 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E396391Length: 655 bp (869 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E396391 [] (trimmed) CTGTAAATTATTTGTGCATATATTTGCTGAGCTTTCTTAGTTTACATAGAATCCAGGTAAGCTCTACTCGGTTTCCAGGAACCCATACATTGTAT
ACTCTACTAAATTTGACATTGCTAGATGACATCTAATCCTAAGGTAGGGCGAATAACACTACATATATTGATCTCCCTCTTCCCTTTCTTGATGG
GACGTCGGTGAAATAACCTTCAAATGAAAAAGAAAAAAAAAACGAAATAAAGAAGATTACAAGTCTTGCAAAGGGAAGGATTGAATATTAGCTGA
CTCAAGTGACCAAATCTTGACGGAGGCAGTAACGCTAGCCCCTGTGGCATTGTTGAAAACAAAGAGTCGTGCTGCTCCATTTACTGCCTTTGTTG
GGTAAATTCGCGATGTTATGACTGTTCTTCCTCCTTGAGCAAAGCTCTCCACAATTGAGTGATCCACCAATAATCTCATTGAATGTTTTTCACCG
TCCAACACAGGTACTGAACTACCATAAACTTGTTTACCAACTCCCGGAGCCTCAGAGGATCTAGTTTGATCAGCACAGAAGTGAGTCTCTGCACG
ACCATCAGCTCCTTTAGAAATGTAAAAGTAAACTGGCGTTAACTCAGATAGCGTTTGATCAGCAATTACAATGACACCAAATGGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396391] SGN-U578195 Tomato 200607 Build 2 342 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197717 [Download][View] Facility Assigned ID: FA0AAD23CE12FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0061 Quality Trim Threshold: 14.5