EST details — SGN-E396359

Search information 
Request: 396359Match: SGN-E396359
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C186040Clone name: TUS-48-P6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C186040 is on microarray TOM1 spot ID 1-1-3.4.7.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C70012 [cLER-13-E6] Trace: SGN-T94587 EST: SGN-E283893 Direction: 5' Facility: TIGR
Clone: SGN-C186040 [TUS-48-P6] Trace: SGN-T192770 EST: SGN-E391444 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E396359Length: 620 bp (904 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E396359 [] (trimmed) CAGAGGTACATGTCAGACTGGTGATTGTGGTGGAGTCTTACAGTGTACCGGATGGGGCAAACCCCCAAACACCCTAGCCGAGTACGCCTTGGACC
AGTTTAGCAACTTAGATTTTTGGGACATTTCTTTAGTCGATGGATTTAATATTCCAATGACTTTTGCCCCAACAAAACCTAGTGGAGGAAAATGT
CACGCAATTCATTGCACGGCCAATATAAATGGTGAATGTCCTCGCGCCCTTAAGGTACCTGGAGGATGTAACAACCCTTGTACCACGTTTGGAGG
ACAACAATATTGTTGCACCCAAGGTCCATGTGGCCCTACAGAGTTGTCCAAATTTTTCAAGAAAAGATGTCCCGATGCTTATAGCTACCCACAAG
ACGATCCTACAAGCACATTTACTTGCCCTGGTGGTAGTACAAACTATAGGGTTGTCTTTTGTCCTAATGGTGTTGCTGATCCAAATTTCCCCTTG
GAGATGCCTGCAAGTACTGATGAAGTGGCCAAGTGAATTTGAGTTTCTTCATTTTAAATCGCCTCAATTAGTCAACTGATCTCTACCGTAATGAA
AAATCTTAATAGCTCCGTTTTTTAAATATTCACTTTTACTTTATTGATAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396359] SGN-U579414 Tomato 200607 Build 2 213 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197685 [Download][View] Facility Assigned ID: FA0AAD36DH03RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: Multiple cloning site sequence detected -- chimeric clone suspected.
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 1.0000 Quality Trim Threshold: 14.5