EST details — SGN-E396184

Search information 
Request: 396184Match: SGN-E396184
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183185Clone name: TUS-41-I7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183185 is on microarray TOM1 spot ID 1-1-2.1.3.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C65785 [cLEN-11-H15] Trace: SGN-T89638 EST: SGN-E274611 Direction: 5' Facility: TIGR
Clone: SGN-C183185 [TUS-41-I7] Trace: SGN-T191495 EST: SGN-E390169 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E396184Length: 721 bp (898 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E396184 [] (trimmed) ATCAAATCTCATATCATCTTTAATCAAACCATGACAAACTGAACCCTGGACAAGATTACACACATAGCTTTAAAAAAAAACTATGTAAAATATCC
CACCCGACCACCTAGACCTAGGCATATATTAATATTAACATATGCCCTCATTGTAACCATATTATATTAAAATATAGTTTTAGTAATAATAATAG
TAGCAGTAAATAAAATACTCAACTAAAAAACACAATAAACACAACCAAATTTCAATATAAAAAAAAAAAAAACCATCATTCATCAACCATTTGAA
TTTTACTCTTCAACTTTCTCTGGCTCCTCAGATGCAGGGGCAGATTCCTCTGTTTTCTCTGCTTCGGGTTCTGCAACTGGGGCTGCTTCGGGTTC
AGCTACGGGTGCTGGAGCCTCCTCAACGGGTGCTGCAGCAACCGGTTCCTCAGCTGCGGCTGCAGGTTCTTCTGCAGCCACAGGTTCTTCAACTG
GAGCTGCAACAGGTTCTGCTGCAACTGCCACTGGCTCTTCTGATTCTGCGGCTACAGGTTCTGCAGCCGCAGGCTCTTCAGCTACAGGGGCTGCT
ACTTCCTCCGCAGCAGGAGCAGCCTCTTCTGGTGCTGGTGCTGATTCGACCTCAACATCCTTTTCTACAGCGGGGGCTGGTTCCTCCGCCTTGTT
TACCTCTGGAGCTGGGGTAACTTTCACCTCACCTGGAGTAGTCTCTACTGGTGCTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396184] SGN-U581194 Tomato 200607 Build 2 457 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197510 [Download][View] Facility Assigned ID: FA0AAD29AE04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0026 Quality Trim Threshold: 14.5