EST details — SGN-E396049

Search information 
Request: 396049Match: SGN-E396049
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174476Clone name: TUS-18-N10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174476 is on microarray TOM1 spot ID 1-1-7.2.16.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23097 [cLED-4-H4] Trace: SGN-T49520 EST: SGN-E231751 Direction: 5' Facility: TIGR
Clone: SGN-C174476 [TUS-18-N10] Trace: SGN-T197374 EST: SGN-E396048 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E396049Length: 391 bp (895 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E396049 [] (trimmed) CAGATTCATTCTATACAATGGCAGATTTCATGGAGAAAGCGATGGATTTCGTGTCTGATAAGGTGGAGAAACCGGAGGCTGACATCACGGATTTT
GATCTGAAAAAAGTTAGCATGGACAGCATTTCCTATCATGCTAAAGTTGCCGTGAAAAACCCTTACTCTGTTCCTGTACCCATCATGCAGATCTC
GTACACTCTCAAATGCTCCGGCAGGTACTTTTTTTCATGCGTGTTAGTATGTTTCCTCGATTTTGGGTTATATACTGATGATTTTTTATTTTTTT
TTGTGAAATAATTAATGCAGGGTTATAGTATCAGGAACAATTCCAGATCCAGGGAATATAAAGGCAAATGACACAACTATTTTAGATGTGCCAGT
GAAGGTACCTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396049] SGN-U578486 Tomato 200607 Build 2 22 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197375 [Download][View] Facility Assigned ID: FA0AAD6DG05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0022 Quality Trim Threshold: 14.5