EST details — SGN-E396021

Search information 
Request: 396021Match: SGN-E396021
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174346Clone name: TUS-18-H24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174346 is on microarray TOM1 spot ID 1-1-1.4.15.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C22929 [cLED-4-A19] Trace: SGN-T49187 EST: SGN-E231418 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E396021Length: 557 bp (867 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E396021 [] (trimmed) GTTCTTTAGGTCTAAGTGCCACAAGAACTTTAAGATGAAGAGGAATCCTCGTAAAGTTAAATGGACTAAAGCATATAGACGGCTGCATGGAAAGG
ACATGACTCAGGACTCAACATTTGAATTCGAGAGGAAGCGTAATAGGCCAGAGAGATATGACAGGAATGTAACTGAGAACACTTTGAAGGCCATC
AAGAAAATTGATAAAATCAGAGTTGACAGGGAGGAGAGACATATTGCAAAGAGGATGAAAGGAAATAAAGCCAAGGAGCAGAGAGAAGCAACAAA
GGAGCTCGAGCAGAGCATTCACATGGTCAAAGCTCCTTCTGTGCTCTTCAAAGAGCCATCACTTACACTACCTACCAAGGTCAAGGTTTTGCAAA
AGCAGTCAGAGGAAAATCGCATGGAGGAATGAACGGGGGGGGGGGATATTCTATTTTTTCAAACTAAAAAAACACTAAATCGGTCCATACTTATT
TTTGCAGTATGTATAACATTTTGATGACTTTGACATGCTAAGCTTTCCCTTACCTTCCGAATAGTAATGGTTTTTCCACTTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396021] SGN-U580399 Tomato 200607 Build 2 26 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197347 [Download][View] Facility Assigned ID: FA0AAD6DD12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0097 Quality Trim Threshold: 14.5