EST details — SGN-E395797

Search information 
Request: 395797Match: SGN-E395797
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174273Clone name: TUS-18-E23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174273 is on microarray TOM1 spot ID 1-1-2.1.15.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C7797 [cLEC-40-E6] Trace: SGN-T32139 EST: SGN-E210075 Direction: 5' Facility: TIGR
Clone: SGN-C174273 [TUS-18-E23] Trace: SGN-T197122 EST: SGN-E395796 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E395797Length: 351 bp (838 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E395797 [] (trimmed) CTCATTTTAGGGTTTCATCTCTGGTTTTTCTTCTTCAACAATCGTAATTTCTCTGATCTGATAATCTTGGAGGTTGATTTTAATTTGTTCAGAAA
AGTCAGATTCAGAAAAAATCTGAGAATTTTGATAATTATTCAGGTGAATGATCTAATGGAGTCTAAAGGTGGGAAGAAGTCTAGTAGTAAATCCT
CACTCTATGAAGCACCCCTTGGCTACAGTATTGAAGACGTTAGACCATACGGTGGAATCAAGAAGTTCAGATCTGCTGCTTACTCTAACTGCGCT
CGCAAATCCTTCTTGATTTTTCTTAATTCTTCTATTCTATTCTAGCACGTGTCTCCTGTAACTAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395797] SGN-U577418 Tomato 200607 Build 2 33 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197123 [Download][View] Facility Assigned ID: FA0AAD6AC12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.933 Expected Error Rate: 0.0088 Quality Trim Threshold: 14.5