EST details — SGN-E395667

Search information 
Request: 395667Match: SGN-E395667
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173936Clone name: TUS-17-G22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173936 is on microarray TOM1 spot ID 1-1-3.3.17.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C6427 [cLEC-35-G16] Trace: SGN-T30656 EST: SGN-E210308 Direction: 5' Facility: TIGR
Clone: SGN-C173936 [TUS-17-G22] Trace: SGN-T196994 EST: SGN-E395668 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E395667Length: 740 bp (842 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E395667 [] (trimmed) AACAAGAACAGTAAGCTTTCTTTTTTGCATAATGCAACAAAAGTAGTAGCAGAATTAGAAGAAACTAGTAGGATATGAGTATGAAAGCACTGTAC
AAATCTGGTCCCCAGAATTACAACCACAATCTGCACAAATTACAGGAGATGAGACAGAAACGTCGAAAGATAACAAATTCTTAGCATCGAGAAGA
CTTGTATAGCATTCTGAAACTCGATACTCGTTTTGATAAATTCCATTCGAACTTTATGAATAAACCACGTTGCGTTGGGATCAAGCAGGTATTGG
TTCCTCCAAAACTTTCTTTTGCACAGACACGGCAGTTGAAGTATCTTGAGTGTCCTCGATAACAGCTTCTGAAACGACTGGTGCTTTAGTTGGTA
CGTCAGGTAGATCCAGTTTCTCTTCAACGTTTTCACCAGAAGGTATTGCAGAAGGAACTTCTGGCAGATCTTGAAGTGTTAACTGAGATTCCAGA
TTCTCAAATTCTGCTAGAACTTCCTCTTCATCTTCAGCAGATAGCTTCTCTCCAAGAATAGCATTGACTTCGTCTTGATAAGCTTTTGCCTCTGC
AGTATCATCCATTAACTTTTGAACATCCTCTAGATTGATCTCACCTTGTATTGCTTTGATTGCATTATTCCCAGTTTTCAAACTCTCAAAGACAG
CCTTTTGCTTGCTTGTCAGTTCAATATCTGCCAATTGCTGCTCAACATTTATGAGCCCAACATCAACTTGCTTTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395667] SGN-U566688 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196993 [Download][View] Facility Assigned ID: FA0AAD5BD11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0044 Quality Trim Threshold: 14.5