EST details — SGN-E395606

Search information 
Request: 395606Match: SGN-E395606
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173568Clone name: TUS-16-H14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173568 is on microarray TOM1 spot ID 1-1-3.4.18.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C3466 [cLEC-20-K9] Trace: SGN-T27585 EST: SGN-E205803 Direction: 5' Facility: TIGR
Clone: SGN-C173568 [TUS-16-H14] Trace: SGN-T196931 EST: SGN-E395605 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E395606Length: 534 bp (860 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E395606 [] (trimmed) AAGGAAGGAGGATGTGACTATAAGACGGTGCAGGAGGCGGTGAATGCTGCACCGGAGAAGGAGCAAACCCGGAAGTTTGTGATATGGATCAAATC
CGGGTTGTATGAGGAGAAGGTTCGGGTCGGGTTGGAGAAGATGAATGTGGTGTTTTTGGGTGATGGAATGGGTAAAACTGTCATTACGGGTTCGT
TGAGTGTTGGTCTTGCTGGTGTTACTACTTATGAGACTGCAACTGTTGGAGTTGTTGGTGATGGATTCATGGCTAGTGGTATCACCTTCCAAAAC
ACAGCCGGTCCGGATGCTCACCAAGCCGTAGCATTCCGATCCGACAGTGATCTTTCCGCTGTAGAAAACTGTGAATTCATTGGCAATCAAGACAC
CCTATACGCCCACGCTTTGCGCCAATACTACAAGTCCTGCCGTATCCAAGGTAATGTAGACTTCATTTTCGGAAACTCAGCTTCTTTCTTTCAAG
ACTGTGACATCCTAATAGCACCTCGACAACTCCTTCCTGAAAAGGTAGAGACCAATGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395606] SGN-U585616 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196932 [Download][View] Facility Assigned ID: FA0AAD4DD07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.987 Expected Error Rate: 0.0030 Quality Trim Threshold: 14.5