EST details — SGN-E395430

Search information 
Request: 395430Match: SGN-E395430
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173598Clone name: TUS-16-I20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173598 is on microarray TOM1 spot ID 1-1-5.1.18.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C3549 [cLEC-20-P12] Trace: SGN-T27860 EST: SGN-E206078 Direction: 5' Facility: TIGR
Clone: SGN-C173598 [TUS-16-I20] Trace: SGN-T196757 EST: SGN-E395431 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E395430Length: 672 bp (900 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E395430 [] (trimmed) GTATAATTTCGAGGAACTGATCGTATAGCTAACAATAAGCTGTTGACAACACATGAAATATTTGTATTCTCTTACTAACAAAGGCACCCGAATTA
TTCGTTACACTATTTCTGATAATTTTTTTATTGACAACACGACTAAATAAGCAACAACCACATACAGTAGGAAGTTCTAAACACAGGCTAGGAAC
AGGACTCTAAATTTCGCCGTCTAGACTATGTAACCACCATGTTATTTATAACCCTTTGTATCCTTGCCTACAAAATTATCATAAGAATGAGAAAA
ATACTGGAGCTTCTCTTTCATTAGTCAGAAATTCTGATCTCAACTCCCAGTAGGTCCTTCACTTGCTCATACGCCACGAAAGCAATAGATATTGA
AGGAACAACCTTCACTGAATTGGGCACTAAACCCTTGTACAAGGCTCTGACACCCTCATACTTCACAGTTTTCCTGAAAGCATCAATCATTCCAG
TATATTCGAGAGGAGCCTTGCTCCTCCCATCACCAGTAACAATAGATGCAGCATGACTCCATCCCACCATCTGCATCCTTCTACGAATAACATCA
AGAGGGTAGGCAACCGTTTGTCCAACTGTTCCTGCAGCAGCTCCACATGCCAGCCTTGTAACAACCCCAAGCTCAAAATTATCAACAAGACCAAA
TGGGTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395430] SGN-U568441 Tomato 200607 Build 2 35 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196756 [Download][View] Facility Assigned ID: FA0AAD4BE10FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0037 Quality Trim Threshold: 14.5