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EST details — SGN-E395318

Search information 
Request: 395318Match: SGN-E395318
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184063Clone name: TUS-43-M21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184063 is on microarray TOM1 spot ID 1-1-4.1.18.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C1209 [cLEC-11-E23] Trace: SGN-T25524 EST: SGN-E201577 Direction: 5' Facility: TIGR
Clone: SGN-C184063 [TUS-43-M21] Trace: SGN-T196645 EST: SGN-E395319 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E395318Length: 668 bp (876 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E395318 [] (trimmed) ACACGTACCTCAGTGAGATTAAAATATCCATAAAATATTAGAAATTACAGAGTATTTACATATATCAACTCACCATAGCATCAAACAAAATTGGC
TAGAACTCTGATAAAAGTAAAAACAGTATGGTTCTGGCTTATATTTTACCTGCAGTAATTAAAGTTTAATCACGGCCATTATTCTCACCTTGCCA
TGTCCAAACAATATCTTTAAGGGGAGGCCGTACATCTTCTTCACAGAACTTTTTATATTCTAAGGTGTCTCCGGCAGATTTTGAGAATTCAACAA
TCGCCACTTGTGGTGCAACTTCGAAAACTTCAGCCATGACTGACAATTTCCCTTTTCGCCCATTCGATGTTCCTTGCATCTTCACCTTGAATTCC
TTAGCGGATACAATCTGAAAATTCACCTTCTTCGCTAAAGATTCGAGTTTTGACATGATCGTTGAAGCAGAGCATTTCGATGTGAAAAGAGAACC
GGATTTCTTTTTACCTTCAAAAAGGCTAGATAAATCGAAACCTGAAGACATTGACGATATGAATTCAAATGCGTTGTAAAAAGGTGGGGCTGATT
TTGATCTAGCTCCCAAACTTGGTTCTTTGGTTTCCTGTTTCTGATCTGTGTTGTTTTCTTCGATGGAAGAAAAAGAAGAAGATCGATTGAATTCT
TTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395318] SGN-U586105 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196644 [Download][View] Facility Assigned ID: FA0AAD31AG11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.961 Expected Error Rate: 0.0020 Quality Trim Threshold: 14.5