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EST details — SGN-E395315

Search information 
Request: 395315Match: SGN-E395315
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184055Clone name: TUS-43-M13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184055 is on microarray TOM1 spot ID 1-1-4.1.18.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C1136 [cLEC-11-A14] Trace: SGN-T25549 EST: SGN-E201602 Direction: 5' Facility: TIGR
Clone: SGN-C184055 [TUS-43-M13] Trace: SGN-T196640 EST: SGN-E395314 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E395315Length: 557 bp (864 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E395315 [] (trimmed) CTCTCTCTCTCTTCACACTTCTCGCATTTTAGAAAGAACCAAACGACGAAACCAGAAGAAATTATTCAAAAATTAACTCGTCTGCGTTTGATCTG
ACTCTTCAACTGACTTTTTCTATTCAATTTCTACAATTTGAATATGCATTTTGTGGTGTAAATTGATTGAAAATCTCTATTTGCTGGAATCGTTG
AAGAAGAAATGCTTCGATACTGCTTTGTATTCATCGAGACAGGAACATCCACGGAATGGAGGGCTGCACCAGAAGGAATTATGCAGAGAGGTGCA
GAGATTAGTGTCTGTGACTTCTGCAAGGTTCATTTATGGCGTCCACTGGCCTTGGCCACGGAGGAGCAGGCAGTTCTAGAAGTGCGAATGGATTC
AAGAGTTCATCTAGTTCAGTTGACTGGTTGGGAAGAGAGATGTTTGAGATGAGGTTGAGAGACAGGGCGGACCATGATGATGATGGGGACAGTGA
ACCAGATATAATTGATGGTGTGGGTGCAGAAACAGGGCATGTTATTAGAACCAGTATTGGTGGTCGAAATGGTCAACCTAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395315] SGN-U568453 Tomato 200607 Build 2 25 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196641 [Download][View] Facility Assigned ID: FA0AAD31AG07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0028 Quality Trim Threshold: 14.5