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EST details — SGN-E395091

Search information 
Request: 395091Match: SGN-E395091
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181001Clone name: TUS-35-N7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181001 is on microarray TOM1 spot ID 1-1-2.2.17.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C66594 [cLEN-14-M19] Trace: SGN-T90336 EST: SGN-E276790 Direction: 5' Facility: TIGR
Clone: SGN-C181001 [TUS-35-N7] Trace: SGN-T197727 EST: SGN-E396401 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E395091Length: 604 bp (848 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E395091 [] (trimmed) AAAGATTGGGTTTTCCCTGAACAAGCACTTCCTGCTGATCTCCTCAAAAGAGGAGTGGCTGTTGAGGACTTGAGCTCCCCACATGGCATTCGTTT
ACTGATTCTGGACTATCCATATGCTGTTGATGGCTTGGAAATTTGGGCAGCAATCAAAAGTTGGGTAACAGAATATTGCAAGTTCTATTACAAAT
CTGACGAGACAGTAGAGAAAGACACTGAACTCCAAGCTTGGTGGAAGGAGCTCCGCGAAGAAGGACATGGCGACAAGAAAGATGAGGCTTGGTGG
CCTAAACTGCAAACTCGACAAGAGCTCAGAGATTGTTGCACCATCATTATATGGATAGCTTCAGCACTTCATGCAGCACTCCATTTTGGCTTATA
CTCTTACGCTGGTTATCTCCCTAATCGCCCTACTTTAAGCTGTAATTTGATGCCAGAGCCAGGAAGTGTTGAGTATGAAGAGCTCAAGACAAATC
CAGACAAGGTATTCCTAAAAACATTTGTTCCTCAGTTGCAATCACTGCTTGAAATTTCCATCTTTGAGGTCTCGTCAAGGCATGCTTCAGATGAG
GTTTACTTTGGGACAAAGGGACTCAATTGAATGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395091] SGN-U578028 Tomato 200607 Build 2 233 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196417 [Download][View] Facility Assigned ID: FA0AAD23CG04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0075 Quality Trim Threshold: 14.5