EST details — SGN-E394848

Search information 
Request: 394848Match: SGN-E394848
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183769Clone name: TUS-43-A15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183769 is on microarray TOM1 spot ID 1-1-2.1.19.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C8030 [cLEC-4-B15] Trace: SGN-T24327 EST: SGN-E201377 Direction: 5' Facility: TIGR
Clone: SGN-C183769 [TUS-43-A15] Trace: SGN-T199679 EST: SGN-E398353 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E394848Length: 531 bp (886 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E394848 [] (trimmed) ACATTGAATTGCAAAAGTCATCATAGGAAAAACAAAATCTAATCTTGGATTGCCAATACATTTTAAAACATATAGACAACAAAATTTGGTAAATA
TATGAAAAATGTACAATGACAAAACCAAAATAGGTATAGTCTCTCTATGAGTCACCTACCGCGAGGAGACTTTTGATAGGCTTGTAATGGAAAAG
CAAACGGTGTCATATGCAGGGGTGAACGATGATGTCTCATAGGCGATACAGCCACTGGGCTAGGAATAGCTCTATGATAGGTATGTGAAAGTTTG
CTAAGGCCTTTTGGTGATTGAAGTTCTTCAAGAGCAGTTAAAACCTCGGACATTTTGGGGCGAAGCTTGGGTTCATTGCTTAAACACTGCCAAGC
AAGGTTAGCACCTGTATATGCTCCTTTCTGGGGATACTGGCCTTCTAGTTTGGTGTCCATTAGTCGAAACAACTTGCGTTTGTCCCCTAAATATG
GCTTTGCCCAATCTACAAGATTCTGCTCTATACCTACCTTTTGTGTTGTCAACTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E394848] SGN-U582401 Tomato 200607 Build 2 43 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196174 [Download][View] Facility Assigned ID: FA0AAD31AA08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.970 Expected Error Rate: 0.0065 Quality Trim Threshold: 14.5