EST details — SGN-E394844

Search information 
Request: 394844Match: SGN-E394844
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183761Clone name: TUS-43-A7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183761 is on microarray TOM1 spot ID 1-1-2.1.19.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C3242 [cLEC-1-M3] Trace: SGN-T24630 EST: SGN-E200417 Direction: 5' Facility: TIGR
Clone: SGN-C3242 [cLEC-1-M3] Trace: SGN-T24631 EST: SGN-E200418 Direction: 3' Facility: TIGR
Clone: SGN-C183761 [TUS-43-A7] Trace: SGN-T196171 EST: SGN-E394845 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E394844Length: 547 bp (883 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E394844 [] (trimmed) GACTTACACATGAAATTTCATATCTGGATAAGAAGCTTTTACATTTACTAGGTCTCAATCCAGATACAAGCAGAGAGATTCTGCTTTTATTCGCT
ATTTGCTTAACAAAATGAAAGGAAAGTTCAAGCTAGTAATTAGAAATCAATAGAACTTCTATGCACCCTTAGTTATTGCATCTAAAAGCTATTGT
ATGTCCTTGAATCAAACTATGAGCAGTTAAAACTAATATGAAGTCTTCGTCTTCAGAGTAGAACTGCTGCTGCATAAACAAGCTGGCTCCAATTA
TTAAGAAGTCCAGGAGTACTGCGCCAATGATTGCTACGTTCACTTGAATGCTGGCTGTTTTGAGCTGAAGGTCTTCACATACGTCCACAAATGTA
CAGTTAATTTCAGTGGAAAGGAAGAAGATTAAAAGGAGAAAATTATATGAGGTTTTTCATCCTCACATAATTAGTGATGCGGGGGAGAAGCTGGT
TCCATGTATCAGGTAGTCCAGGGAGACACCAGTGGCTGCAATCTACACCAGGGTGACCGCCGCTGTACATTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E394844] SGN-U571214 Tomato 200607 Build 2 120 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196170 [Download][View] Facility Assigned ID: FA0AAD31AA04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0049 Quality Trim Threshold: 14.5