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EST details — SGN-E394342

Search information 
Request: 394342Match: SGN-E394342
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C172734Clone name: TUS-14-E20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C172734 is on microarray TOM1 spot ID 1-1-5.1.20.10 [Order] [Tomato Microarray Database]
See unigene SGN-U577360 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C172734 [TUS-14-E20] Trace: SGN-T195227 EST: SGN-E393901 Direction: 3' Facility: INRA
Clone: SGN-C172734 [TUS-14-E20] Trace: SGN-T195375 EST: SGN-E394049 Direction: 5' Facility: INRA
Clone: SGN-C172734 [TUS-14-E20] Trace: SGN-T195667 EST: SGN-E394341 Direction: 3' Facility: INRA
Clone: SGN-C172734 [TUS-14-E20] Trace: SGN-T195667 EST: SGN-E399540 Direction: 3' Facility: INRA
Clone: SGN-C172734 [TUS-14-E20] Trace: SGN-T195668 EST: SGN-E399048 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E394342Length: 664 bp (877 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E394342 [] (trimmed) GAATATCGAAATGCATATAACTGAATTGATCTAATCATCCCATTCCAATGGTTTATAACAACTGGCCATAAAATAAAAAACTAAAATATACGAAG
GAGCATATTCCCAGAGAGTATGACATGCTCTGATCCAAGAACAAGATAAAGACATTCTAAAACTTACAACCATCATCACTCAGAACGATTGGCAT
ACCTCTCCACCTTTTCATCAAGATTGATTCCAACCATAGCCTCACCAAGCCCACAGCTAATTTCAGCCAGCAATTGTGGGTCACTGTAATGAGTC
ACTGCTTGCACGATGGCACGTCCCCTCTTTGCAGGGTCACCACTCTTGAAGATACCAGAACCCACGAACACGCCGTCACATCCCAACTGCATCAT
AAGCGCTGCATCTGCTGGTGTCGCCACCCCACCTGCTGCAAAGTGAACCACAGGGAGCCTACCAAGTTGCTTTGTTTGCATCACCAGATCGTATG
GTGCCTGAATCTTCTTAGCAAAGGTGAAAACCTCATCATCGTCCATGTTGCGCAGCACCCTGATATCACCCATAACGGAACGCACATGACGAACA
GCCTCGATAATGTTTCCGGTACCAGCTTCCCCCTTGGTCCGAATCATGGCAGCACCCTCACGGAATACGCGAAGAGCCTCACCCAAATTACGGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E394342] SGN-U577360 Tomato 200607 Build 2 70 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195668 [Download][View] Facility Assigned ID: FA0AAD2BC10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0035 Quality Trim Threshold: 14.5