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EST details — SGN-E394191

Search information 
Request: 394191Match: SGN-E394191
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183464Clone name: TUS-42-D22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183464 is on microarray TOM1 spot ID 1-1-3.4.1.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C183464 [TUS-42-D22] Trace: SGN-T195518 EST: SGN-E394192 Direction: 5' Facility: INRA
Clone: SGN-C183464 [TUS-42-D22] Trace: SGN-T195980 EST: SGN-E394654 Direction: 3' Facility: INRA
Clone: SGN-C183464 [TUS-42-D22] Trace: SGN-T195980 EST: SGN-E399449 Direction: 3' Facility: INRA
Clone: SGN-C183464 [TUS-42-D22] Trace: SGN-T200481 EST: SGN-E399606 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E394191Length: 523 bp (870 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E394191 [] (trimmed) GAAGAATGAAATGAGATAAAGAATCAATAAAAATACACAAAGACTTTGTTGATGAGATAATATGGTACAAAGAAAATAAACAAGGAGAGAAACAC
TAACAAAAGAATAATAAATCAAGTTTTTCTCACAGTAAATAACCATGACACATTAAAAAAAAAGAAGAAGATAAAGATGCAAATTTTTAGACGTA
TACGATGATTAAACCACCTTTGGTGCTTCTTCCACCTTAATTGCAGGTGCCACGTCAGCAACAACAGTAGCAGGTGCTTCTTCCTTGTTTGGTTC
TCCAGACTCAATAACTATCTCCTTCTCCTTCTCCTTCACCTTCACCTCCACCTCTTCAGTTGACGTGGCGGCTGGTGCATGCACGTCATCAGCAG
CCGCGGGTTCCTCTTCCTTCTTATCTTCTGTGACTATGAAAGTTGGAAACTTTTTCAAACACAAAAATAATTTGGGCCCGATACCTAGGAAGGCC
CCAAAGTTTGAACTTGCTTCCCTAACAACCTTTTGATCCCGGAAAATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E394191] SGN-U580472 Tomato 200607 Build 2 105 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195517 [Download][View] Facility Assigned ID: FA0AAD30DB11FM2
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0141 Quality Trim Threshold: 14.5