EST details — SGN-E394125

Search information 
Request: 394125Match: SGN-E394125
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182917Clone name: TUS-40-N3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182917 is on microarray TOM1 spot ID 1-1-6.2.5.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C133035 [cTOD-4-J13] Trace: SGN-T142622 EST: SGN-E330457 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E394125Length: 368 bp (872 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E394125 [] (trimmed) GGTTCCACACAGAGAATCAATGGAACAAATCTAGCTAAGCGTGTTGCTACTCCACTTCCTGCAAAGAAACAAAAATCTAAAGAACTTCTGCCTGC
TGAAGATCTAAAGGTTTTACCTTCAGATGAAGGTTTCAGCTGGGCTAATGAGAACTATAATTCCATCCAAAGAAGTATAGATGTGTGGTCCTTTG
TCCTTTCGCTGCGGGTGCGTGTTTTCTTGGACAATGCGAAATGGACATATGTGGGTGGCTTTACTGAAGATAAACAGAAAGTGAGAAGACGTGGA
ACAGCTTCATGGTTAAGAGAATGTGTGCTGCAGCTTGGCCCAACATTTATCAAACTTGGGCAGTTATCCTCTACTAGATCTGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E394125] SGN-U573869 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195451 [Download][View] Facility Assigned ID: FA0AAD28CG02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0043 Quality Trim Threshold: 14.5