EST details — SGN-E394076

Search information 
Request: 394076Match: SGN-E394076
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C172916Clone name: TUS-14-M10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C172916 is on microarray TOM1 spot ID 1-1-7.1.20.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E394076Length: 622 bp (856 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E394076 [] (trimmed) GGGTACCGGGCCCCCCCTTTTTTTAATCCTCAAAAGGCCATTAGTGCAAAAACATCTTAGCCCAATCACAATGTTCATTCATATGGCTTCTCCAA
TGAGGCCCAAACCATATCAAGTACAAAGCCCAAAAGGCCTAAAAGATTATTCAAGGAACGACCAAAACTAAAATCTACTTTCTTCCATAAAAGTT
TCGAAATAGAAATAAATCAAAATAAAATAGCCAAAGTTAACACAATGACTTTCATCTTGAAGACTCTTATTCATCATCCCCTTACCAATTTATCA
TCACCACCACAACCATACTCACTTATCTAGGAAAAACTAATATTTCTCATAATCCTTGCTTAGAAAACTATAATTACATTCAAGCATCAGCAATT
TCAGCTTCATCAGCTGCAGCCAACATAAGCTCCGGGAGGACGCTTGTTTCTGCAGTTCCATCAAGGGCGTTGGGCAATCCCAACGCTCGTAGGGC
GAGGTGAGCTGCCTTCTGTCCTGATATCATCATAGCTCCAAAAGTTGGACCCATTCGTGGTGCTCCATCAATTTCAGCAACTTCCATTCCTGTGA
CAATCATACCAGGTACGACCTCTCTGGTAAGTCTAAAAATCGCGTCCTCAGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E394076] SGN-U580030 Tomato 200607 Build 2 241 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195402 [Download][View] Facility Assigned ID: FA0AAD2BG05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.951 Expected Error Rate: 0.0025 Quality Trim Threshold: 14.5