EST details — SGN-E394063

Search information 
Request: 394063Match: SGN-E394063
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C172824Clone name: TUS-14-I14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C172824 is on microarray TOM1 spot ID 1-1-3.1.20.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C11004 [cLEC-6-N9] Trace: SGN-T24192 EST: SGN-E202531 Direction: 5' Facility: TIGR
Clone: SGN-C172824 [TUS-14-I14] Trace: SGN-T195240 EST: SGN-E393914 Direction: 3' Facility: INRA
Clone: SGN-C172824 [TUS-14-I14] Trace: SGN-T195682 EST: SGN-E394356 Direction: 3' Facility: INRA
Clone: SGN-C172824 [TUS-14-I14] Trace: SGN-T195682 EST: SGN-E399068 Direction: 3' Facility: INRA
Clone: SGN-C172824 [TUS-14-I14] Trace: SGN-T195683 EST: SGN-E394357 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E394063Length: 428 bp (854 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E394063 [] (trimmed) CTAGGATGCATTATGTAAATGAAAATTGCTGGATTGTTCCGTGATGCTGCTGCGTAATTCTTTTTTTTTCACATTCCACCAACTGAATTCAGTTT
CTTGAGTGGTGCATAATTCTTCTTTTCTACTCCAGTTTGTATTATTTTGATGGGTTTGAAATTCTTTTTTCCGGGTATTCCCTATTTGTACATAC
ATGCCTCAATCTATTTCAATGTGTTTGTACATATTGACTATCAAGTTAATATTGCAGGGCATCATCAGTTTTTAGCATTCTTTTGCTGCTCCTCC
GTGATTCCTCCAATTTTAAGATTAGGATACAAGCAGCTGCAGCTTTGGCTGTTCCAGCAACCTTAAATGATTATGGCAGATCATTCTTTAGTGTC
CTTCAAGGTGTGCAACATGTTGTCGAGAGTCGCGGTTCTGATGAAATA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E394063] SGN-U564576 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195389 [Download][View] Facility Assigned ID: FA0AAD2BE07RM2
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.942 Expected Error Rate: 0.0028 Quality Trim Threshold: 14.5