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EST details — SGN-E393866

Search information 
Request: 393866Match: SGN-E393866
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183309Clone name: TUS-41-N11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183309 is on microarray TOM1 spot ID 1-1-6.2.3.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C69256 [cLEN-9-I5] Trace: SGN-T88944 EST: SGN-E275072 Direction: 5' Facility: TIGR
Clone: SGN-C183309 [TUS-41-N11] Trace: SGN-T195350 EST: SGN-E394024 Direction: 5' Facility: INRA
Clone: SGN-C183309 [TUS-41-N11] Trace: SGN-T195636 EST: SGN-E394310 Direction: 5' Facility: INRA
Clone: SGN-C183309 [TUS-41-N11] Trace: SGN-T195636 EST: SGN-E398877 Direction: 5' Facility: INRA
Clone: SGN-C183309 [TUS-41-N11] Trace: SGN-T195822 EST: SGN-E394496 Direction: 3' Facility: INRA
Clone: SGN-C183309 [TUS-41-N11] Trace: SGN-T195822 EST: SGN-E398876 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E393866Length: 529 bp (857 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E393866 [] (trimmed) GCAGCAAATAGAACTAGCGCTTCAAACAAACAGAATTAGTTTAAACTACTAATACAAAGTATGATCAGCTAGCATCTCGAAATCAGAAGCTTCAT
TTCAGTGATTCTACAATTACTATTGATAAGATTGCACTCCTAGCCAAGCCAGAACAATTTCCTCAAGAGCTGGTCTGATAGTTTGCGTCAACATG
TTTTGGTAATCAATCACATCACCACTTGACCTACTCAGTTCAATGAAGTAATTGGATACGGAAATTTCAAAGATTTGCACGCCAATGCACAGGGT
CTCATATCTGCTCTCATTTAATCCCTCTAATATAAGAAATCCACCTTCTTTCTTCTTTACTTCAAGGTTCAGACTCCTGCCAACTTCCACAAGTT
TGGATATGATGACTGGGACAGGTTCCACTGATGTAAAAAGCAGCTCCTCCTTTTGATCATTGTTTATGAATAAACCAGACAAATTAAACTGGCAG
AGGATATTAAATGCACTAAAGATTGCAGGTTTTATCAACTCTAATTTGGTGTCG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E393866] SGN-U572172 Tomato 200607 Build 2 62 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195192 [Download][View] Facility Assigned ID: FA0AAD29CG06FM2
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.946 Expected Error Rate: 0.0018 Quality Trim Threshold: 14.5