EST details — SGN-E393336

Search information 
Request: 393336Match: SGN-E393336
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181989Clone name: TUS-38-G11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181989 is on microarray TOM1 spot ID 1-1-6.3.10.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C4480 [cLEC-25-N3] Trace: SGN-T28689 EST: SGN-E205273 Direction: 5' Facility: TIGR
Clone: SGN-C181989 [TUS-38-G11] Trace: SGN-T199338 EST: SGN-E398012 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E393336Length: 569 bp (831 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E393336 [] (trimmed) GCTAACACGTATTTCATTCATTCGGGAAATAATCACATTGTGTGGGTAAGCTATATCCAAAATTTGTCTTCATAGAACATCAGTATATGATTTAT
TTTATTCAACTAGGGCCAAGATGACCAATAGTGATAAATAAATATACAACACAAAATGGAGAACAACCATTAAACTGGTGTAGCAAGAAAACCAG
AATTATGGAGAACCAAGAATCAGCAGAAAATGACCATAAACTTGATCCTGGTAATCATTCAGAGATGAATCTTAGTTCTTTACTGTGGTTACCTG
CCTCAGAAGCATCTGGACAACATCGTTGGAGATGCTTTCAGATTCTGCTTTCAAGTGTTGGATCTTTGCAAACGTTTCTTGATCAAGACGTTTGA
CATTAGCACCCGAATCACCGCTAGTCTGTTCAAGCTTTCTCTGGAACTCGGCCTCCATGAATGCACGAAATTCAGCTATCTCCTTCTCAGCTTCA
TCCTTTGCCTGTTTCAATCTAGCCTGTTTTGCACTCCTGGCAGCATTGACAATGTGTTGAGCTTCTTGCTCTGCACCTAAAAGTTGTTGAATTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E393336] SGN-U579934 Tomato 200607 Build 2 24 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T194662 [Download][View] Facility Assigned ID: FA0AAD26AD06FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0051 Quality Trim Threshold: 14.5