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EST details — SGN-E393171

Search information 
Request: 393171Match: SGN-E393171
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182201Clone name: TUS-38-P7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182201 is on microarray TOM1 spot ID 1-1-2.4.10.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C81322 [cLET-15-L19] Trace: SGN-T106532 EST: SGN-E293581 Direction: 5' Facility: TIGR
Clone: SGN-C81322 [cLET-15-L19] Trace: SGN-T106533 EST: SGN-E293582 Direction: 3' Facility: TIGR
Clone: SGN-C182201 [TUS-38-P7] Trace: SGN-T199372 EST: SGN-E398046 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E393171Length: 492 bp (898 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E393171 [] (trimmed) GGAAAAGAAATCTTGTTTATTTTATTTTTGGTGAGTTTTTGATTTTCAATTAAGTGAGAAGCAAATGGCCTCAACAACTACCCCTTCACTTTCTC
TCTCTTCTTCATCGACCCTCGTCGACGGCAAGACAACTCGTCAGTCTGCAGCCGTGGCATCGTCGCAATGTGTGACACTACCAACCCTTCCGCCG
CGGCCGGCCGTTCAAAGCCGTGCTGCCAGAACCACTGCTTACTGTAGAAAGATTGCAAGGAATGTGGCCGCAATGGCTACATCAACTGGAGAAGT
TGCCACTGCAGATGCCACAGCTGAAACGGCAACCACTGAGCTACCATCAGAGCTTGTCCAAAAGATTCAAGAAGTTTGGGACAAAGTTGATGATA
AGTACGCAGTCAGTTCATTGGGCGTTGCTGCATTTATTCTTCTTTGGAGCTCCACTGGAGTGATCTCGGCAATTGACAGGCTTCCTTTGAATCCT
GGTGTTCTTGAGCTTGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E393171] SGN-U581101 Tomato 200607 Build 2 61 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T194497 [Download][View] Facility Assigned ID: FA0AAD26CH04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0014 Quality Trim Threshold: 14.5