EST details — SGN-E392933

Search information 
Request: 392933Match: SGN-E392933
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181484Clone name: TUS-37-B10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181484 is on microarray TOM1 spot ID 1-1-7.2.12.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C141929 [cTOF-18-F1] Trace: SGN-T157397 EST: SGN-E345676 Direction: 5' Facility: TIGR
Clone: SGN-C181484 [TUS-37-B10] Trace: SGN-T199294 EST: SGN-E397968 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E392933Length: 594 bp (852 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E392933 [] (trimmed) CCATTACCTTAAAAGGAAGCTTGAGATTACCTAGGTTATATTGAACTAAACATTTTATTGTCACAAGATGTTACAACAGAACAATAGTTTTTCCA
GCATAAAGAGTCTACTAATATGTACAAAGAATAAAATTAGGAACTCCTGCTGCACTTTCTCTCTTTTATCTATTAATGTACACAGCAAGATCATT
CCCCGGAAATATATGCTGCCTCCAATATCCGACCATTCTGAGCAATACATCTCAAGTCTATAACGTAATTGTCTCGCAAAAACCCAAAACCAAAG
GTTCCATTTTCATACTGCCAAATCCTTCCCTCCGCCTGCCTAGGATTAACGGTGCTTCCTGCCAAATCAGGAATAACCAAGTCGTAGCTTGAGTT
CATGCAAAGCATGCACAAAATTACTCTCTTATCAGCACTAGGCAGAATATCACATAAGTCATCAGCTTCAGCAAGGGGCTGAATATGCATACGAC
CCTCATATATGTTCTCTTCCTCTGAAGATAAAGGCGACTCAATGAATGTGGTATTCGAAAGCGTTTTGAAGTACAGGGGAAATTGGAGATATCTG
ATGGAGTGAGGAAGGAGAGGATAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392933] SGN-U583423 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T194259 [Download][View] Facility Assigned ID: FA0AAD25DA05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.959 Expected Error Rate: 0.0182 Quality Trim Threshold: 14.5