EST details — SGN-E392545

Search information 
Request: 392545Match: SGN-E392545
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180844Clone name: TUS-35-G18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180844 is on microarray TOM1 spot ID 1-1-7.3.17.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64130 [cLEM-5-D19] Trace: SGN-T85232 EST: SGN-E271427 Direction: 5' Facility: TIGR
Clone: SGN-C180844 [TUS-35-G18] Trace: SGN-T193629 EST: SGN-E392303 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E392545Length: 622 bp (863 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E392545 [] (trimmed) AATGGATAATCAAAACAGAATATCGCCACAATCTCAATGCGTTACAACACCAGCAGACAAAGGCACATTTGAGCTGAACGACTCCCATTGAACTT
CTCTCAATATCTTAAATCTTTCATCAAATGTAACAAACCCAGCTTGGGGTGCTACAGAACCAGATGTTCCAGCTTTATAGAGTAATACTGTGGTG
GCCCCAATATCAGGTCCATGAAGCTTTCCTGTTAGCAACACCCGAAGGGGCATGAAGAGAGATTTTCCCTTGCGCTTCAGCAATTTACCGAACTT
CTTCACCCAGTTTCTCCATCCAGGTTGGCCTTCTGCAAGTGCACCACAGAGCTCACCACTGTCGTAGGCTGCTAACAAGCTCTTAGCAACTTCAG
AGACTCCATCTTCTAAGATCAGTTTTCCTTCCGTGCTTGTCAAAGTTTCATATAAAGGATAAGATAGCAAACTTGAAAGTGCTTTCTCTGAATCT
GGTATCAAGTCAATCCCATCTTTGAGGAGTAGAACAGCATCCTGTACAAAAACTCCTTGTGATTCTGTAACGATGTCTGCATCCTTCCACCTTTC
ACCAATGATTTGGTTCAACTCTTCAGATGGAAGTGATCTCAAATGCTGACCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392545] SGN-U570864 Tomato 200607 Build 2 32 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193871 [Download][View] Facility Assigned ID: FA0AAD23BD09FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.970 Expected Error Rate: 0.0048 Quality Trim Threshold: 12.5