EST details — SGN-E392497

Search information 
Request: 392497Match: SGN-E392497
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181418Clone name: TUS-36-O16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181418 is on microarray TOM1 spot ID 1-1-1.3.14.2 [Order] [Tomato Microarray Database]
See unigene SGN-U578039 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C15905 [cLED-14-G24] Trace: SGN-T52013 EST: SGN-E233659 Direction: 5' Facility: TIGR
Clone: SGN-C181418 [TUS-36-O16] Trace: SGN-T193590 EST: SGN-E392264 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E392497Length: 663 bp (846 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E392497 [] (trimmed) AATCACAACTTTTTTTTTGGGAACAAAGCTAATAAAAGAGTCTAAAAGACACCTCATATAGTCAAACTAGTAGTACTTAGTAATCCTATGTACAA
CATATTATTGTTCAAAGAAACTTAGCAAATGCCTTTGGAGTTTGGACAACTAGAGTCGTACGAGATCTATCAAAAATAGTTTCTCTACCTATACA
GGATAGAGACAAGACTGTGCGCTTGCTTGTGTACGTGCGTACATATAATTATCTTCAGACTCCACTTGGGGGATTTATACTGATCTAAAGTAGGA
TCGAGCCAAATCTTGTAACCTAACAACTCAATATTGCCAGAACCAACAAGGTTGATCTTCAATTTGGAAACTCAAATTGCATGAATTCGCTTGAA
TTTGATCTCCGATTTCGGGGAAATATAGAAAGTTCTTGCTTAGGTTGTCATCTTCATCTCGAGAAAAATCAGATGGCTCTTGTTCAAATACATTT
GATGAATGATTCCCATCAGTGTAATGTGGGCTATCTGAATCAATAACATCACTTTTTGCTGATGTTGCATCTTCTTGTTTGCACATTAACTTTGG
TACATTTGAGGTAACAACAATTGGAGTTGTTGCTTTTTGAGCCTCTTGTGTGTCTATTGGACTAATTGGTTCACTTTGCTCTGAGTTTTCTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392497] SGN-U578039 Tomato 200607 Build 2 54 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193823 [Download][View] Facility Assigned ID: FA0AAD24BH08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.954 Expected Error Rate: 0.0031 Quality Trim Threshold: 14.5