EST details — SGN-E392314

Search information 
Request: 392314Match: SGN-E392314
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180892Clone name: TUS-35-I18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180892 is on microarray TOM1 spot ID 1-1-7.1.17.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64865 [cLEM-7-I5] Trace: SGN-T84856 EST: SGN-E270058 Direction: 5' Facility: TIGR
Clone: SGN-C180892 [TUS-35-I18] Trace: SGN-T193639 EST: SGN-E392313 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E392314Length: 667 bp (833 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E392314 [] (trimmed) AAAATCTCCATTTTAAGTCACTTCTTCAATTTGAAGAAATTCTCATGTACAACGTCAACAACAATATGGTCATCAATGTTGCCTCAATGGAGATA
TTGTAACAAGAATTTGCATTATTGGATATTACCACCTTCAAAAACTAAACTTAGCTTCTTTTATTTACCTATTTTATCTTCTTTCACTAATAATA
ATGATTCTGTATCACCCATCAAACAAAATCAGGCTATGTATGACCCTTCAGAGGAGCTTTTTGGACTTGATGCTGATTTGCAGCCAAGGAAGGTC
ATTTCTAGTTCATCGAGTCCGAGATCATGGTTTGGCCCAAATGGACAGTATATAAGAGAACTGCCTTGTCCAAGCTGCAGAGGAAGAGGCTACAC
TTCATGTACTGAATGTGGAATCGAGAGATCCAACTTAGATTGTTCGTTGTGTAATGGAAAGGGTATGATAACTTGTCATCAGTGTGGTGGAGATT
GTGTCATTTGGGAAGAGTCTATCGATGAACGGCCTTGGGAGAAAGCTCGATCAAGTTCACCTTTAAAAGTAAAAGAAGACGATGAAGTGGACAAC
TTAGACATAAAGCTTGACGCGAAGAGAAAAACCAAGCGTGTCTACCAAATCTCCCAACACAGAAATTCATTTTAAAAATCAACAGATCACTAAAA
TT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392314] SGN-U567697 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193640 [Download][View] Facility Assigned ID: FA0AAD23BE09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.970 Expected Error Rate: 0.0076 Quality Trim Threshold: 14.5