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EST details — SGN-E392203

Search information 
Request: 392203Match: SGN-E392203
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181068Clone name: TUS-36-A2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181068 is on microarray TOM1 spot ID 1-1-7.1.15.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C181068 [TUS-36-A2] Trace: SGN-T1666 EST: SGN-E378433 Direction: 5' Facility: Giov. Lab
Clone: SGN-C181068 [TUS-36-A2] Trace: SGN-T193968 EST: SGN-E392642 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E392203Length: 655 bp (834 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E392203 [] (trimmed) GAAAAAGAGTCCTTCATCAACAATCGGTGATTTGGAAGGTTCAACTAAGAGTCACAAGAAGAAGAAAGCGCGTGAACCAAAAGACGACCAGGAGG
AGGGACCTGAAGTGATGAAGGCTAATGATGAGAGATCAGATGATGAGATGTCAAAACGAACTAAAACTGAGGAGAAAGACGGTAAATCTGAAGAA
GGATCCAAGAAGGACAAGAAGAAGCATAAGCGAAGCTCAAATAAATCATCCTCAAAGAAGGAAGCTGGAGAAGTTAAAACCAAGAAAACTCCTTC
AAATTCATCAAAAAGCTCAAAGAAAAATGATAACAACGATGCAAATTCAGAAGTGCATTCAAAGAAGAAAACTACTGAAGTAGTTAAGGGAAATT
CATCTACACCAAAAAAACCTAGTTCAAAAGACAAAACTGGGAAAAAAGATCCGAATGGGAAGGGCCATAAGAAAGCGAATAAATTGAAGCCAAGT
GATGATGAACTCAGAAGTGCAATTTGTGAAGTTCTAAAAGAAGTTGACTTTAATACGGCCACCTTTACCGACATTGTGCAAATGCTTGCCAAGCG
GTATGATACCGATCTTACACTCAGAAAGACATCTGTTAAGAATATGATCCAGGATGAGCTCACTAGGCTAGTCGATGAGGCTGAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392203] SGN-U576784 Tomato 200607 Build 2 20 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193529 [Download][View] Facility Assigned ID: FA0AAD24BA01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.927 Expected Error Rate: 0.0027 Quality Trim Threshold: 14.5