EST details — SGN-E392153

Search information 
Request: 392153Match: SGN-E392153
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180445Clone name: TUS-34-G3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180445 is on microarray TOM1 spot ID 1-1-6.3.19.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C26521 [cLEF-40-K9] Trace: SGN-T60097 EST: SGN-E246245 Direction: 5' Facility: TIGR
Clone: SGN-C180445 [TUS-34-G3] Trace: SGN-T193478 EST: SGN-E392152 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E392153Length: 607 bp (853 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E392153 [] (trimmed) AGAATGAGGTTTACAGGGGTCAACAATACAGCCAAATATATTTTGCTAGGCTCCATTTGATGCGAACTCTCCTTTACTCTATCATTCCCAATTGG
AAACCCCATTTACCTGTCTGTACTGTTCTAGGATTAGAGGAAGGCAAAGAATGCATTATAGTTGGGACACTCTACAAGCACATGAAGCTTAAACC
TTCTATTCTGGATGAGTACTCTAAGGAGAGATCTGCTTCACCACTTGTACAACGTCATAACTTTATGCACCTAGATGATAATTTAGTTCTGGAAG
ATGAGAGCGGAAGAGTCAAACTAAGTGGTTGTTTGCTGCCGTCTACATATGTAACAGGAAATATTATTGCATTGCATGGAAAAGAAACTAGTGCA
GGTGAATTTTTTGTTGAAGATGCTCTAGAGGCTGGCCTACCACAACAGATAGAGCAGCCAATTCAACTAGGTGAAGATAAATATGTGGTTTTCAT
CTCTGGTTTGAGTGTTGGAAGAAGCTCTTCTAATCCTCTCCAATTTCAACTTTTAGTTGATCACATTACTGGACATTTAGGAAATGAAAAGGAAC
AAAATATTGCAGCTCAAATAATTCAAGTTGTTATTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392153] SGN-U568661 Tomato 200607 Build 2 41 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193479 [Download][View] Facility Assigned ID: FA0AAD22AD02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.958 Expected Error Rate: 0.0047 Quality Trim Threshold: 14.5