EST details — SGN-E392094

Search information 
Request: 392094Match: SGN-E392094
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176538Clone name: TUS-24-D8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176538 is on microarray TOM1 spot ID 1-1-1.4.9.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C26959 [cLEF-42-B3] Trace: SGN-T60604 EST: SGN-E247560 Direction: 5' Facility: TIGR
Clone: SGN-C176538 [TUS-24-D8] Trace: SGN-T193421 EST: SGN-E392095 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E392094Length: 619 bp (859 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E392094 [] (trimmed) CACTGTACAATAAACAGTTGATTTACAGACAATTTGAATCTAGGTATCTTATGCTTCTATAGTTGGAAGTAAAGTAATTTGGCAAAAGCAAAACA
CAAACAAAAACCAAGCCATGTACAGAAGGAAATTTGCATTACCACAAGGCCAAAGCCATATCCAACAAATAAAAAAATCAGCTTCATCACCATGG
TTTCACATCCAAACTGATCAAAAAGCATTGCAGGTTGGAATAGCAAAAGGAATCAGGGCAAAACAAGCAGCTCAATAAAGCTTTATTCTGGTTTG
AATTGAACTTCGACATATTGGGCAATTCTCAAGCGCTCTCCCACACTCACAACATGTCTGATGCCCACAGCCAAAGGCCATGTCTTTTGGGTTAG
TAAGACAAATGGGGCAAACCTGATTGTCATAGGTAGAACTGGGAGCAGTGTAGGGCGAACTCGGAGCAAATGGAGCATTGTCAACTGGGCGAGCA
CTGTCGTAGTAAGAACTTGAAGTCGGCTGAAAATGTGGTTCTGCATCTGCAGGGCTTCCATAACCATAATACGAGCTTGCAGGCTGCTGAAAACT
TGGTGCATGTGAGGTCTTTGAACCACCGACAGAACTTGCCCCATACATA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392094] SGN-U577065 Tomato 200607 Build 2 35 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193420 [Download][View] Facility Assigned ID: FA0AAD12DB04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0071 Quality Trim Threshold: 14.5