EST details — SGN-E392077
| Search information |
| Request: 392077 | Match: SGN-E392077 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C176787 | Clone name: TUS-24-N17 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C176787 is on microarray TOM1 spot ID 1-1-8.2.9.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C27879 [cLEF-45-N22] | Trace: SGN-T61362 | EST: SGN-E246627 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C176787 [TUS-24-N17] | Trace: SGN-T197858 | EST: SGN-E396532 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E392077 | Length: 554 bp (859 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E392077 [] (trimmed)
ATATGGGATCTGCAAGAACTTCATCTGGGATTCAAAAGCCGATAGCTCTTCAGATAGCGTGTTCACAGTGTTACCGTCAACTGTCAATGAAGTGC
TGGAACAGGACTTCAGTTTTTTCTCTGGTCTGGAATCATCATCAAAATGAGTCTCATTGGTTTCCAGAACTTCCGACAGAACAGATGAGATCTCT
GGAGTCCTTGCACACGGTTCAGCCCAACCGAAATCAGAGCAGTCAAAAGTGTTACTTGCTTCATCAGAGCTGAAGTAAACATTTGTACCAGCTGA
AGGGGAAACTGAGCCCAGTCCCATATCTACAGCAGTAAAAGACACATTCTCGAAGCCGTACTGCTTGGTTGCTGGTTTCTCTTCGAAAAAACTGA
ACGAATCATCAGATCCACCATCCAAGTTACTAATATAAGTCATGTTGGGCTGAACTGTGTTCAGGGTTTCCTCACGAAGTGCCTTTTGGGGATTT
TGCTTAATAACACATCTTGAAACAGACACTGGAACTTCATCAAGAAAAGTTCACCTTAGCTTTCTTGCCTCTGATCCTT
TGGAACAGGACTTCAGTTTTTTCTCTGGTCTGGAATCATCATCAAAATGAGTCTCATTGGTTTCCAGAACTTCCGACAGAACAGATGAGATCTCT
GGAGTCCTTGCACACGGTTCAGCCCAACCGAAATCAGAGCAGTCAAAAGTGTTACTTGCTTCATCAGAGCTGAAGTAAACATTTGTACCAGCTGA
AGGGGAAACTGAGCCCAGTCCCATATCTACAGCAGTAAAAGACACATTCTCGAAGCCGTACTGCTTGGTTGCTGGTTTCTCTTCGAAAAAACTGA
ACGAATCATCAGATCCACCATCCAAGTTACTAATATAAGTCATGTTGGGCTGAACTGTGTTCAGGGTTTCCTCACGAAGTGCCTTTTGGGGATTT
TGCTTAATAACACATCTTGAAACAGACACTGGAACTTCATCAAGAAAAGTTCACCTTAGCTTTCTTGCCTCTGATCCTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E392077] | SGN-U579115 | Tomato 200607 | Build 2 | 87 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T193403 [Download][View] | Facility Assigned ID: FA0AAD12CG09FM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0082 | Quality Trim Threshold: 14.5 |
Working
