EST details — SGN-E392019

Search information 
Request: 392019Match: SGN-E392019
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176752Clone name: TUS-24-M6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176752 is on microarray TOM1 spot ID 1-1-3.1.9.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C27792 [cLEF-45-I24] Trace: SGN-T61427 EST: SGN-E246692 Direction: 5' Facility: TIGR
Clone: SGN-C176752 [TUS-24-M6] Trace: SGN-T197848 EST: SGN-E396522 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E392019Length: 391 bp (924 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E392019 [] (trimmed) TGGCATGCTGGATTACGATAAAAGGTTGCAACATTCCTTCACTGCTCACCCGAAGGTTGACCCTGTAACTGGGGAAATGTTTACCTTTGGCTACT
CGCAGACACCACCTTTCGCTACATATAGAGTCATATCCAAGGATGGTGTCATGCAAGATCCAGTTCCAATAACGATACCAGCATCTGTTATGATG
CACGATTTTGCTATTACTGAAAATTATGCAATTATGATGGATCTTCCATTGTACTTCAGACCAAAGGAAATGGTGAAAAATAAACAGCTGGCATA
CAGCTTTGACCCCACAAAGAAGGCTCGTTTTGGAGTTCTTCCACGCTACGCAAAGAACGAATCCCTAATCAAGTGGTTCGAGCTTCCTAACTGCT
TCATATTCCAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392019] SGN-U570698 Tomato 200607 Build 2 44 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193345 [Download][View] Facility Assigned ID: FA0AAD12BG03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.990 Expected Error Rate: 0.0010 Quality Trim Threshold: 20.5