EST details — SGN-E391991

Search information 
Request: 391991Match: SGN-E391991
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180349Clone name: TUS-34-C3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180349 is on microarray TOM1 spot ID 1-1-6.3.19.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C26301 [cLEF-3-O21] Trace: SGN-T59345 EST: SGN-E244364 Direction: 5' Facility: TIGR
Clone: SGN-C180349 [TUS-34-C3] Trace: SGN-T193316 EST: SGN-E391990 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E391991Length: 579 bp (854 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E391991 [] (trimmed) CGCCTGAGAAAGAGAGTCGAAGCTACAGAATTTCAGTTCGCCGCTGCGGAAGCTCCATAGCCAAACTCCTTCCGCCGCAGCGTTCTTATTCAGAA
ATTCTCTTGCTCCGACTCCGATCTCGATATCATAATAAGCAATGGCTCGTTCTTTCTCTAACTCTAAGACTCTCTCTGCTTTCGTCTCCGACTCC
GTTTCTGCTTTTCTCAGCAGGCGTGGATATGCAGCGGCATCACAAGGTGCAGTTTCCGGTGTAGCAAAAGGAGTGCCAAGGAGCAACGTGATGAT
GCAAAAAAGTGGAGAGGAATCGGTGAAGACTTCATGGGTGCCAGATCCAGTTACCGGTTACTATAGGCCGGAAGGACAAGCAAATGAGATTGACG
CTGCTGAGCTCCGGAAGATGCTGTTGAAACACAGATCTGGAAGCAACTGAAAATCTTTGAAGCTGCGCCGTTGATCTCCGGTTACTCATCGGAGA
TTTTCGATCAACGAGAAAAGAGAATTTAGTGAAGGAACTGTTTTATCAGAAAATATAGCAGTGTGAAATTTACTCGTGCTTTGTTGCTTTTAAAT
TTTAAGCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391991] SGN-U580139 Tomato 200607 Build 2 487 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193317 [Download][View] Facility Assigned ID: FA0AAD22AB02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0066 Quality Trim Threshold: 12.5