EST details — SGN-E391948

Search information 
Request: 391948Match: SGN-E391948
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177828Clone name: TUS-27-J2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177828 is on microarray TOM1 spot ID 1-1-7.2.6.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64087 [cLEM-5-B2] Trace: SGN-T85261 EST: SGN-E271456 Direction: 5' Facility: TIGR
Clone: SGN-C177828 [TUS-27-J2] Trace: SGN-T197836 EST: SGN-E396510 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E391948Length: 636 bp (837 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E391948 [] (trimmed) ATAAACACAGTAAAACTTTTATTAAATTTTTGCATTACAAGACCAGTAAAAAGAGAATTAATGAGTAAATTAATTGATAAAGAATGTGCACTCTT
TTTTTCTTCATTTTTCCCCATCTCCTTGTGGAGGTGATTCCCCACGTCATTGGTTTAATTCGAAGGCTTGAAACTATTCAATTTTTCTCTATTAT
CCAGACAATCACATTCGATCTCACATTTATTTCTACAAATAGATTCGGTACAGTCCTTGACACATTCGTCGTAGCAGCCCTTGAAAAGTTCAGCA
GTGGTGTTGTGCACAGTTGACATCACAACTATGCACATAAAAAATACAATTACAAGCTTATTTGCCTCCATTTTTAACGAAGGATAATTTTTTAA
TATTTTTATTTATAGATTTTGCTTGTTTTTTCGGACTGCTTACTTCCGTTGTAAAGAACACTTTTTTAACTAATATTTGTTCAATTGAATGCTTT
TCTGAGGAATTAAGGTGGTCGAAAACAGCCTCCGATCCAAGAAAGATTGAATCTTTATAGTTTCTGCAATGGCTAACAAACCCTTCAGAAGGACC
TTCTGATGATTTCTTTGACCAAATCTTGGGATTTCCTGCTTACAATGAAACAAACCAAATTTGGCG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391948] SGN-U574028 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193274 [Download][View] Facility Assigned ID: FA0AAD15DE01FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.938 Expected Error Rate: 0.0041 Quality Trim Threshold: 20.5