EST details — SGN-E391891

Search information 
Request: 391891Match: SGN-E391891
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176763Clone name: TUS-24-M17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176763 is on microarray TOM1 spot ID 1-1-8.1.9.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C27829 [cLEF-45-K4] Trace: SGN-T61429 EST: SGN-E246694 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E391891Length: 577 bp (845 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E391891 [] (trimmed) GCTCAAATGGAAGTGAGTTAACAGCCTACCTCTTTTAAGTCACAGAGAGTATATCTTGAAATGGAACTAACTAAAAAACCCTCCCACCACAAATT
TTAGTACATAAAATGCTCGACTGGAACTCAATAAGGACGTGAACGATTTCCACCATGAAACTGTCTATCTGGGCCGGAACCTCCACCGTCTCTGT
AGTTATCCCTGCGCCCGCCACCACCACCACCATAACCTCCGCGACCGCCACGGCCAGAACCAAATGCCGGAGGCGGCTTTGGTGCAGACTTTTCA
GCCATCGCTACAGTGATTTTGTAACCTCTGAAGTCGTGATTATTGAAAAAGCCGCCGGCAGAGTGAGCTGCAGAAGGATCTTCGTATGACAGAGG
GTGCATCTCCTTTGTTATTTCCTTGATCGTCTGTGTATAGCTTTATGCTCCAAGGCCACTGGTCTTTGTAACCTCGTTTTTGCTTGATTCTTGCA
ACTTGTCCAATGCTCCCAAAAAGTTCTCTAAGTTCTTCGACGGTCACATCAGGAGGCAAATTTGAGATATATATTCTTGCGTTGTCACAGAGATC
TCCACAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391891] SGN-U567006 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193217 [Download][View] Facility Assigned ID: FA0AAD12AG09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: Multiple cloning site sequence detected -- chimeric clone suspected.
Passed all screens and filters
Sequence Entropy: 0.988 Expected Error Rate: 1.0000 Quality Trim Threshold: 14.5